CDS

Accession Number TCMCG051C01146
gbkey CDS
Protein Id XP_024439277.1
Location join(6477272..6477948,6478751..6478892,6478993..6479047,6479480..6479593,6479695..6479791,6479878..6479944,6480042..6480101,6480262..6480877,6481342..6481718,6482446..6482666,6483112..6483196,6484349..6484423)
Gene LOC7477810
GeneID 7477810
Organism Populus trichocarpa

Protein

Length 861aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024583509.1
Definition SART-1 family protein DOT2 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description U4 U6.U5 tri-snRNP-associated protein
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11984        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000387        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000481        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009933        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010087        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010305        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010588        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046540        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048532        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048825        [VIEW IN EMBL-EBI]
GO:0048826        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0097526        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATATGGACTGGTCTGAATCTAGGCACGAGCGACGTGAAGAGAGGGATGATGTGGACGACAAGGTGAATGGAGTTGAAAAATCGAGTAAGCATACTAGGAAGAAGAGCGGCAGAGGAGAGGAGAGAGAGAGGGAGAGGGATAGGGATCATAAGAGTAAAGACAGGGAACGGTCGAAGAAAACCAGCGATAATGATGTTGGTAAAGATAAGAGTAGAGATAGTAAGGTGAAGGATAAAGAATATGACCGAGAGAAGTCTAGAGAGAAGGATAAGGATAGGAAAGATCGAGGGAAGGAAAAGGAAAGGGAGAGGGATAGGGAAAAGAAGGAAAAGGAAAGGGAAAGAGTGAAGGAGAAGGAGAAGCATAAGGATAGAGAGAAGGACAGGGATAATGATAAAGAGAGGGAGAGGGGGAGAGAGAAGACTAAGGAGAGAGAGAGAGACAGGGAAGCGGATCAAGATAAAGAGAGGTCCAGAGAGAAGGATAGGGCAAGCAGAAAAAGCAACGAGGAAGATTATGATGACAAGGTTCAGATGGATTATGAAGATGAAGTGGACAAGGATAATCGAAAACAAGGGAAGGTTTCTTTTCGTGATGAAGATGATCAAAGTGCTGAAGGTGCATCAGCTGGAGCTCACTCATCTGCCTCGGAGCTTGGGCAACGCATTTTGAAGATGAAGGAAGAAAGAACAAAGAAAAAGTCTGAACCTGGTTCTGACATTTTAGCATGGGTTGGTAAGAGTCGCAAGATTGAGGAGAACAAGTATGCTGCGAAAAAGAGAGCCAAGCATCTCTCAAAGATTTTTGAGGAGCAGGACAATATTGGTCAAGGAGGCAGTGATGATGAGGAAGCAGACCAGCATAATGCTTATAATCTTGCTGGAATCAAGGTTCTTGATGGCCTTGACAAGGTATTGGAAGGCGGAGCTGTTGTTTTGACACTCAAAGATCAGAATATACTTGCAGATGGTGACATCAATGAAGAGGTTGATATGCTTGAAAATGTGGAAATTGGAGAGCAGAAGCGCCGGGATGAGGCTTATAAAGCTGCTAAGAAAAAGACGGGTATCTATGAAGACAAGTTCAATGATGATCCTGCTTCAGAGAAGAAAATGCTTCCGCAATATGACGATGCCAATGCAGATGAGGGCGTAACTCTTGATGAAAGGGGCCGCTTCACTGGCGAAGCAGAGAAAAAGCTGGAGGAGCTCCGCAGAAGGCTACAAGGTACTTCCACAAGTGCTCGCTTAGAAGATCTAAACTCATCTGGAAAGATCTCATCAGATTACTTTACTCATGAAGAGATGCTTCAGTTTAAAAAGCCAAAGAAAAAGAAATCTTTGCGAAAGAAGGATAAGCTAGATATAGATGCCCTTGAAGCAGAAGCTGTGTCGGCAGGGTTGGGTATTGGAGATCTTGGTTCTAGGAAAGATGGGAGAAGGCAGGCCATTAGAGAGGAACAAGAGAGATCTGAGGCTGAAATGAGAAACAATGCCTACCAATCAGCTTATGCTAAAGCAGATGAGGCATCAAAATCACTGCGACTAGATCGAACTCTACAAACTAAAGTGGAGGAAGAGGAAAATCTAGTGTTTGCAGATGACGAAGAAGATCTTTATAAGTCATTAGAAAGAGCAAGGAAATTAGCTCTTAAAAAGCAAGAGGCGGAAGCATCTGGTCCTCTAGCAATTGCTCACCTTGCCTCCACCACTTTAAGCAGTCAAATTGCAGATGATAAAAACCCTGAAACTGGAGAGTCACATGAAAACAAACTTGTGTTCACCGAGATGGAAGAGTTTGTCTCAGCTATTCAGCTTGCTGAAGTTCACAAGCCTGACAACGAAGATGTTTTCATGGACGAAGATGAACCACCAAGAGTTTCTGATGAAGAACAAAAGGACGAGGCTGGTGGATGGATGGAAGTTCCAGACAACAGTAAAGATGAAAATCCTGTCAATGAGGATGAGGAGATAGTTCCTGATGAAACCATACATGAGGTTGCTGTTGGGAAAGGATTATCTGGTGCACTGAAGTTGCTTAAAGAGCGAGGTACACTTAAAGAAAGTATTGACTGGGGTGGCAGAAATATGGACAAGAAAAAGAGCAAGCTTGTTGGTATCGTAGATGATGATGTTGGTACTAATAATGATAATAAGTTCAAGGATATCCGCATCGAGAGGACAGATGAATTTGGGCGAATTATGACTCCGAAGGAAGCCTTTCGAATGATTTCTCATAAATTCCATGGGAAGGGGCCTGGCAAAATGAAGCAAGAAAAGAGAATGAAACAATACCAGGAAGAATTGAAGTTGAAGCAAATGAAAAATTCAGATACACCATCACTGTCTGTGGAGCGGATGAGGGGAGCTCAAGCTCAATTAAAGACACCTTACCTTGTCCTCAGTGGTCATGTTAAACCAGGGCAAACCAGTGATCCTAGAAGTGGCTTCGCAACTGTTGAGAAGGATTTCCCAGGAGGCTTAACACCCATGCTCGGTGATAAAAAGGTTGAGCACTTCTTGGGGATAAAGCGCAAGCCTGAGACTGGATTCTCTGGTGCACCAAAGAAGCCTAAAATTTGA
Protein:  
MDMDWSESRHERREERDDVDDKVNGVEKSSKHTRKKSGRGEERERERDRDHKSKDRERSKKTSDNDVGKDKSRDSKVKDKEYDREKSREKDKDRKDRGKEKERERDREKKEKERERVKEKEKHKDREKDRDNDKERERGREKTKERERDREADQDKERSREKDRASRKSNEEDYDDKVQMDYEDEVDKDNRKQGKVSFRDEDDQSAEGASAGAHSSASELGQRILKMKEERTKKKSEPGSDILAWVGKSRKIEENKYAAKKRAKHLSKIFEEQDNIGQGGSDDEEADQHNAYNLAGIKVLDGLDKVLEGGAVVLTLKDQNILADGDINEEVDMLENVEIGEQKRRDEAYKAAKKKTGIYEDKFNDDPASEKKMLPQYDDANADEGVTLDERGRFTGEAEKKLEELRRRLQGTSTSARLEDLNSSGKISSDYFTHEEMLQFKKPKKKKSLRKKDKLDIDALEAEAVSAGLGIGDLGSRKDGRRQAIREEQERSEAEMRNNAYQSAYAKADEASKSLRLDRTLQTKVEEEENLVFADDEEDLYKSLERARKLALKKQEAEASGPLAIAHLASTTLSSQIADDKNPETGESHENKLVFTEMEEFVSAIQLAEVHKPDNEDVFMDEDEPPRVSDEEQKDEAGGWMEVPDNSKDENPVNEDEEIVPDETIHEVAVGKGLSGALKLLKERGTLKESIDWGGRNMDKKKSKLVGIVDDDVGTNNDNKFKDIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSLSVERMRGAQAQLKTPYLVLSGHVKPGQTSDPRSGFATVEKDFPGGLTPMLGDKKVEHFLGIKRKPETGFSGAPKKPKI